Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1978
Parameters: 2 7 7 80 10 50 1000
Length:  46010

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10632--10820
70
2.7
70
94
2
317
42
12
13
31
1.81
10644--10865
70
3.2
71
88
3
299
43
11
14
30
1.80
12875--12938
32
2.0
33
87
3
94
31
17
15
35
1.91
21347--21388
21
2.1
20
91
8
68
54
9
0
35
1.33
22721--22759
20
2.0
20
85
10
53
43
7
12
35
1.72
27411--27497
16
5.4
16
76
0
84
16
12
27
43
1.84
27411--27502
48
1.9
48
81
0
112
16
13
27
43
1.84
28379--28414
16
2.2
16
95
0
63
33
5
11
50
1.61
28469--28513
22
2.2
19
84
11
54
53
4
2
40
1.33
30314--30370
18
3.1
18
79
5
60
61
0
0
38
0.96
32086--32138
21
2.5
21
81
6
63
30
5
13
50
1.64
33331--33440
37
3.0
37
92
5
197
37
9
18
35
1.82
36499--36548
15
3.0
16
80
13
57
50
2
2
46
1.24
37740--37793
18
2.9
18
78
10
65
50
0
0
50
1.00
38357--38392
2
18.0
2
88
0
54
0
44
2
52
1.15
42472--42515
2
22.0
2
95
0
79
50
2
0
47
1.13

Tables:   1

The End!