Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1990
Parameters: 2 7 7 80 10 50 1000
Length:  36414

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3565--3614
3
16.7
3
95
0
91
64
0
0
36
0.94
3727--3766
20
2.0
20
90
0
62
65
7
0
27
1.20
4149--4222
20
3.5
22
70
21
59
54
0
0
45
1.00
4147--4212
20
3.2
20
77
10
64
56
0
0
43
0.99
7356--7405
26
1.9
26
100
0
100
28
16
12
44
1.83
7629--7708
37
2.2
37
97
2
153
46
8
26
18
1.78
8583--8610
2
14.0
2
100
0
56
50
0
0
50
1.00
10261--10303
11
3.7
11
79
11
50
60
0
2
37
1.10
10864--10918
27
2.1
27
83
10
69
40
1
1
56
1.21
11734--11777
18
2.3
20
88
7
65
34
0
0
65
0.93
13620--13667
19
2.6
18
75
18
53
43
2
2
52
1.24
14271--14304
11
3.2
11
91
4
52
73
5
0
20
1.04
15402--15631
114
2.0
115
87
3
333
46
7
24
21
1.76
22897--22966
27
2.6
28
80
8
92
32
0
0
67
0.91
31965--32045
23
3.6
22
74
11
67
50
0
1
48
1.08
34377--34450
32
2.3
32
81
9
89
58
1
0
40
1.07
35773--35802
2
15.0
2
100
0
60
50
0
0
50
1.00
35951--35975
13
1.9
13
100
0
50
32
0
4
64
1.12

Tables:   1

The End!