Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1994
Parameters: 2 7 7 80 10 50 1000
Length:  49085

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--226
28
7.9
28
84
5
215
23
19
28
28
1.98
7299--7343
15
3.0
15
76
0
54
15
0
42
42
1.47
12960--13033
27
2.7
27
91
0
112
22
18
35
22
1.96
15543--15790
80
3.1
80
81
5
243
30
8
29
31
1.87
17924--18048
52
2.4
52
97
0
232
28
18
18
35
1.94
17924--18068
52
2.8
51
90
4
220
29
17
18
33
1.95
18057--18081
13
1.9
13
100
0
50
36
16
16
32
1.90
18124--18221
19
5.8
18
71
28
90
36
17
12
33
1.87
18143--18199
13
3.9
13
76
24
60
33
17
14
35
1.90
18122--18219
32
3.0
32
96
1
178
35
17
12
34
1.87
20750--20906
80
2.0
79
89
1
242
31
22
15
30
1.95
21490--21644
79
2.0
78
93
3
267
29
23
14
32
1.94
23405--23435
13
2.4
13
94
0
53
38
12
19
29
1.89
23484--23543
13
5.1
13
73
22
60
38
16
15
30
1.89
31432--31485
20
2.7
20
82
5
65
38
20
11
29
1.87
31513--31570
19
3.1
18
83
11
80
32
15
15
36
1.89
31554--31580
13
2.1
13
100
0
54
40
14
14
29
1.86
31535--31598
33
2.0
32
87
3
92
39
12
17
31
1.87
38892--38942
20
2.5
21
80
3
68
31
15
11
41
1.83
41870--41942
33
2.2
32
83
9
94
38
17
15
28
1.90
41971--42016
20
2.3
20
85
3
58
34
19
15
30
1.93
47041--47104
33
2.0
32
87
3
92
28
14
15
42
1.86

Tables:   1

The End!