Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1998
Parameters: 2 7 7 80 10 50 1000
Length:  13138

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5667--5699
13
2.8
12
90
9
50
72
9
6
12
1.26
7720--7753
15
2.3
15
100
0
68
38
0
0
61
0.96
11981--12039
15
3.7
16
77
20
61
57
1
0
40
1.09
12034--12225
3
65.3
3
63
22
61
61
0
0
38
0.96
12047--12226
11
18.8
10
67
26
97
60
0
0
39
0.97
12034--12225
64
3.1
63
77
19
197
61
0
0
38
0.96
12024--12225
43
4.5
44
77
19
179
61
0
0
38
0.96
12219--12257
21
1.9
20
94
5
69
58
0
10
30
1.31
12230--12278
13
3.6
13
80
20
64
57
0
10
32
1.32
12210--12286
28
2.7
29
91
6
129
59
0
9
31
1.28
12316--12377
20
2.8
22
78
14
74
53
3
0
43
1.17
12328--12367
10
3.9
11
84
15
59
50
5
0
45
1.23
12326--12367
20
2.1
20
100
0
84
50
4
0
45
1.23
12329--12375
20
2.3
20
92
0
76
51
4
0
44
1.21

Tables:   1

The End!