Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2002
Parameters: 2 7 7 80 10 50 1000
Length:  11512

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4172--4233
29
2.1
30
87
3
90
38
6
22
32
1.80
7870--7933
22
2.8
23
73
21
64
57
0
0
42
0.98
7863--7925
21
2.8
21
83
16
65
58
0
1
39
1.07
8189--8234
19
2.3
20
81
3
58
45
2
0
52
1.13
8516--8552
3
12.3
3
100
0
74
32
0
0
67
0.91
9335--9425
36
2.4
40
78
17
113
54
0
0
45
0.99
10310--10369
27
2.2
27
81
3
66
55
0
1
43
1.10
10317--10369
27
1.9
28
84
3
72
50
0
1
47
1.12
10917--10988
11
6.6
11
73
12
51
34
1
0
63
1.03
10948--11001
17
2.9
18
86
10
74
37
0
0
62
0.95
10918--11016
10
9.7
10
70
20
71
35
1
0
63
1.01
11217--11272
9
6.6
9
84
11
66
41
1
0
57
1.09
11220--11272
25
2.1
25
86
6
72
41
1
0
56
1.10
11220--11272
8
6.4
8
79
14
54
41
1
0
56
1.10
11178--11272
17
5.5
16
73
18
59
43
3
0
53
1.16
11232--11284
8
6.2
8
82
8
52
45
1
0
52
1.11

Tables:   1

The End!