Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2010
Parameters: 2 7 7 80 10 50 1000
Length:  18844

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--10244
476
21.6
476
93
1
16357
29
20
14
35
1.93
3--10244
950
10.8
952
92
1
16422
29
20
14
35
1.93
10042--12758
159
17.1
157
64
13
480
29
20
14
35
1.92
9446--11036
792
2.0
794
91
0
2610
28
21
14
35
1.92
10240--12461
476
4.7
475
91
0
3552
29
20
14
35
1.92
10240--12461
950
2.3
951
91
0
3621
29
20
14
35
1.92
12140--12781
317
2.0
317
91
0
1054
28
21
13
35
1.92
11666--13253
791
2.0
792
91
0
2599
28
20
14
36
1.92
12457--18762
476
13.2
476
91
2
9464
29
20
14
35
1.92
11688--13458
791
2.2
791
86
3
2161
29
20
14
35
1.92

Tables:   1

The End!