Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2019
Parameters: 2 7 7 80 10 50 1000
Length:  16217

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1764--2602
42
20.1
42
80
4
768
15
29
17
37
1.90
1778--2602
124
6.6
124
80
6
772
15
29
17
37
1.90
3095--3152
28
2.1
27
81
9
64
74
0
5
20
1.01
3108--3149
9
4.7
9
82
5
50
78
0
2
19
0.86
3086--3148
18
3.6
17
74
16
58
73
0
4
22
1.02
3202--3265
31
2.1
31
90
0
101
39
18
26
15
1.91
3763--3837
35
2.1
35
85
4
98
30
37
16
16
1.90
3875--4029
46
3.3
46
80
1
175
29
33
12
24
1.93
4009--4178
73
2.3
73
81
7
177
26
37
16
20
1.93
4258--4326
29
2.5
28
83
6
88
24
43
15
15
1.87
10749--10786
20
1.9
20
94
0
67
36
18
7
36
1.80
12972--13007
12
2.8
13
91
4
56
36
19
16
27
1.93
13119--13162
20
2.2
19
84
15
54
29
20
4
45
1.71
15486--15537
21
2.6
20
90
6
79
46
13
11
28
1.78
15572--15615
22
1.9
24
82
17
58
43
18
9
29
1.80

Tables:   1

The End!