Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2022
Parameters: 2 7 7 80 10 50 1000
Length:  26052

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5058--5292
81
2.9
79
79
6
249
35
12
26
25
1.92
7319--7372
20
2.7
20
88
2
81
35
16
7
40
1.77
9546--10086
74
7.5
72
78
10
468
34
14
23
27
1.94
9541--10086
145
3.8
140
78
12
520
34
14
23
27
1.94
11159--11193
16
2.1
17
89
5
54
0
5
5
88
0.63
11158--11196
19
2.0
20
90
5
62
0
5
7
87
0.68
11382--11419
20
1.9
20
89
10
60
36
15
10
36
1.82
13704--13755
27
2.0
26
85
10
72
23
44
17
15
1.86
25431--25465
8
4.2
8
85
7
52
85
11
2
0
0.69
25426--25474
20
2.3
22
89
6
75
83
14
2
0
0.73
25431--25465
17
2.1
17
89
5
54
85
11
2
0
0.69
25426--25475
22
2.4
20
78
18
57
82
14
4
0
0.82

Tables:   1

The End!