Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2029
Parameters: 2 7 7 80 10 50 1000
Length:  9857

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2289--2411
1
123.0
1
75
0
102
86
9
1
1
0.70
2291--2411
45
2.8
41
85
13
138
86
9
1
1
0.70
2291--2411
41
2.9
42
86
9
158
86
9
1
1
0.70
2295--2408
58
1.9
61
87
8
173
85
10
1
1
0.73
2288--2411
22
5.7
21
80
12
119
86
10
1
1
0.72
3849--4323
30
16.0
28
76
11
289
28
29
16
25
1.97
3842--3984
29
5.0
27
82
6
115
30
29
18
22
1.97
3845--4321
58
8.0
60
74
12
310
28
29
16
25
1.97
4063--4321
88
3.0
87
89
5
373
31
29
18
21
1.97
4327--4416
43
2.1
43
93
0
153
26
24
17
31
1.97
5282--5306
13
1.9
13
100
0
50
36
16
16
32
1.90
5262--5327
32
2.0
33
88
2
98
33
12
15
39
1.84
5368--5392
13
1.9
13
100
0
50
32
16
16
36
1.90
5403--5527
51
2.5
51
89
4
189
36
17
16
29
1.92

Tables:   1

The End!