Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2030
Parameters: 2 7 7 80 10 50 1000
Length:  25241

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
603--669
33
2.0
33
85
0
89
31
11
16
40
1.85
688--786
33
3.1
32
84
11
123
32
18
14
35
1.90
740--764
13
1.9
13
100
0
50
32
16
16
36
1.90
753--900
51
2.9
52
83
4
201
33
18
16
31
1.94
14714--14761
1
48.0
1
78
0
51
89
10
0
0
0.48
14712--14758
6
8.2
6
86
9
71
87
12
0
0
0.55
14712--14758
11
4.1
11
86
8
67
87
12
0
0
0.55
14717--14761
18
2.4
18
96
3
81
88
11
0
0
0.50
16140--16346
29
7.1
29
78
6
195
30
26
17
25
1.97
16169--16334
30
5.8
28
79
8
145
30
28
18
22
1.97
16134--16346
57
3.7
57
78
7
205
30
26
16
25
1.97
16163--16327
88
1.9
87
89
3
260
30
28
15
25
1.96
16413--16502
28
3.1
28
90
3
126
35
30
16
17
1.93
16413--16536
28
4.3
28
82
7
117
37
29
15
17
1.91
16654--16737
43
2.0
43
90
4
134
29
23
17
28
1.97
16695--16848
52
2.9
54
82
3
195
25
23
14
36
1.93
17663--17687
13
1.9
13
100
0
50
36
16
16
32
1.90
17750--17774
13
1.9
13
100
0
50
32
16
16
36
1.90
17783--17911
52
2.5
52
93
0
213
35
18
16
29
1.93
21410--21448
20
1.9
21
89
5
62
43
23
15
17
1.87
23399--23527
34
3.8
35
73
19
121
41
3
0
55
1.21
23411--23527
32
3.5
32
75
17
112
41
2
0
54
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23424--23549
65
1.9
66
84
9
168
42
2
0
53
1.19
23650--23697
21
2.3
21
81
0
60
35
20
6
37
1.78

Tables:   1

The End!