Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2035
Parameters: 2 7 7 80 10 50 1000
Length:  20993

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4992--5078
20
4.3
20
85
1
111
32
16
10
41
1.82
6374--6439
19
3.8
18
72
24
70
31
10
18
39
1.85
6377--6447
32
2.2
32
94
0
124
32
11
18
38
1.86
6492--6516
13
1.9
13
100
0
50
32
16
16
36
1.90
6525--6653
52
2.5
52
92
0
213
36
16
17
29
1.92
14889--15008
32
3.8
32
82
7
140
24
28
18
29
1.98
14951--15610
34
20.8
34
72
16
463
20
32
12
34
1.90
15012--15578
61
9.1
61
86
5
785
20
32
11
34
1.89
15012--15610
129
4.8
129
87
5
870
20
33
11
34
1.89
15012--15578
250
2.3
251
94
0
974
20
32
11
34
1.89
15422--15607
95
2.0
95
81
6
225
21
32
12
33
1.91
15612--15772
32
5.0
32
78
7
164
29
33
16
20
1.94
15612--15772
65
2.5
64
84
12
215
29
33
16
20
1.94
15779--16491
49
14.8
48
77
11
640
24
25
17
32
1.97
15779--16443
92
7.0
92
87
4
803
24
25
17
32
1.97
16147--16491
52
6.7
52
78
7
357
23
25
17
34
1.96
15870--16491
154
4.2
152
78
11
502
24
25
17
32
1.96
17302--17430
52
2.5
52
96
0
240
34
17
18
28
1.94

Tables:   1

The End!