Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2042
Parameters: 2 7 7 80 10 50 1000
Length:  21280

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80--115
2
18.0
2
100
0
72
50
0
50
0
1.00
1324--1362
2
20.5
2
89
10
64
48
0
0
51
1.00
1324--1362
9
4.1
10
87
12
64
48
0
0
51
1.00
1944--2012
28
2.5
28
76
7
68
56
0
1
42
1.08
2776--2807
16
1.9
17
93
6
57
40
0
3
56
1.15
4189--4228
13
3.0
13
83
16
55
82
0
12
5
0.82
4314--4382
6
11.3
6
74
20
63
33
0
0
66
0.92
4315--4385
11
6.5
11
75
18
76
35
0
0
64
0.94
13617--13669
18
3.2
16
77
12
54
0
16
0
83
0.66
13617--13669
5
10.8
5
81
18
51
0
16
0
83
0.66
13617--13669
23
2.2
23
83
16
63
0
16
0
83
0.66
14413--14451
2
19.5
2
100
0
78
51
0
0
48
1.00
15071--15100
2
15.0
2
100
0
60
50
0
0
50
1.00
16483--16567
32
2.6
33
83
1
109
47
15
0
37
1.46
17778--17829
21
2.4
22
73
23
56
36
0
3
59
1.16
17792--17839
23
2.2
23
81
7
55
39
0
2
58
1.10
17819--17903
27
3.2
26
78
15
86
49
1
1
48
1.16
19463--19522
24
2.4
25
80
5
68
33
1
0
65
1.03

Tables:   1

The End!