Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2055
Parameters: 2 7 7 80 10 50 1000
Length:  16786

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4159--4309
53
2.9
52
85
6
207
31
17
17
34
1.93
4298--4322
13
1.9
13
100
0
50
36
16
16
32
1.90
4384--4408
13
1.9
13
100
0
50
32
16
16
36
1.90
10358--10418
9
6.4
9
75
17
61
77
1
1
19
0.95
10357--10418
10
6.4
9
78
12
52
77
1
1
19
0.94
12357--12432
33
2.3
32
84
10
93
27
14
17
40
1.88
12721--12796
20
3.8
20
76
1
80
34
13
11
40
1.81
12721--12799
40
2.0
40
85
5
106
34
12
12
40
1.81
16031--16258
34
6.8
34
69
17
86
33
14
14
37
1.87
16060--16237
34
5.3
35
71
14
142
33
16
15
34
1.90
16044--16279
69
3.5
68
76
11
229
33
14
13
38
1.85
16229--16366
68
2.0
67
82
6
163
30
11
14
43
1.81

Tables:   1

The End!