Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2065
Parameters: 2 7 7 80 10 50 1000
Length:  52098

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8964--9017
26
2.1
26
82
0
63
42
5
7
44
1.55
12771--12795
13
1.9
13
100
0
50
36
16
16
32
1.90
12749--12814
19
3.8
19
72
25
65
33
12
15
39
1.84
12753--12819
32
2.1
33
94
2
118
35
11
16
35
1.86
12857--12881
13
1.9
13
100
0
50
32
16
16
36
1.90
12890--13018
52
2.5
52
94
0
222
36
17
17
27
1.93
14229--14271
21
2.2
19
87
8
59
23
18
18
39
1.92
15506--16153
326
2.0
326
99
0
1269
26
23
13
36
1.93
20347--20508
83
2.0
82
95
1
288
38
11
14
35
1.82
25272--25302
15
2.1
15
93
0
53
48
16
22
12
1.80
27333--27370
13
2.9
13
96
0
67
34
18
15
31
1.92
29848--29899
19
2.7
20
87
6
79
42
15
13
28
1.85
31374--31423
22
2.3
22
86
3
75
48
0
2
50
1.12
31390--31441
16
3.2
16
86
0
77
51
0
1
46
1.12
31391--31451
32
1.9
32
83
6
79
52
0
1
45
1.10
31898--31938
15
2.7
15
88
0
64
80
0
0
19
0.71
31898--31936
7
5.3
7
84
9
51
82
0
0
17
0.68
31901--31938
9
4.6
8
84
15
51
81
0
0
18
0.69
38504--38546
19
2.2
20
87
4
61
4
27
2
65
1.25
42862--42892
2
15.5
2
93
0
53
54
0
0
45
0.99
42880--42931
26
2.0
26
96
0
95
63
7
5
23
1.43
43881--43920
20
2.0
21
85
5
55
27
15
15
42
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46986--47162
50
3.5
50
90
0
282
29
24
15
29
1.96
50122--50160
20
2.0
20
85
10
53
38
0
10
51
1.36
51531--51678
51
2.9
51
90
2
233
31
17
18
32
1.94
51667--51691
13
1.9
13
100
0
50
36
16
16
32
1.90
51755--51779
13
1.9
13
100
0
50
32
16
16
36
1.90
51985--52098
50
2.2
51
84
6
142
33
18
18
29
1.95

Tables:   1

The End!