Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2067
Parameters: 2 7 7 80 10 50 1000
Length:  29616

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
599--666
1
68.0
1
91
0
109
0
2
1
95
0.30
599--666
27
2.5
27
95
0
127
0
2
1
95
0.30
4716--4746
14
2.2
14
100
0
62
51
6
12
29
1.65
5359--5411
14
3.6
14
84
5
70
52
0
1
45
1.11
10375--10484
3
37.7
3
73
13
61
30
0
0
68
0.96
10366--10481
21
5.8
21
70
21
79
29
0
0
69
0.94
10368--10447
10
8.0
10
71
10
56
26
1
0
72
0.92
10401--10449
10
4.8
10
85
5
62
34
0
0
65
0.93
10409--10484
21
3.8
21
84
13
90
35
0
0
64
0.94
11120--11149
15
2.0
15
93
0
51
40
0
23
36
1.55
12167--12221
19
2.9
19
100
0
110
25
16
3
54
1.58
12311--12344
17
2.0
17
94
0
59
47
20
11
20
1.81
13388--13414
13
2.1
13
100
0
54
37
7
7
48
1.59
13926--13951
13
2.0
13
100
0
52
38
0
7
53
1.30
13954--13993
21
1.9
21
94
0
71
40
10
7
42
1.67
14001--14040
21
1.9
21
84
0
53
27
15
0
57
1.38
15270--15314
22
2.0
22
82
8
54
13
17
2
66
1.34
15782--15821
20
2.0
20
95
0
71
45
10
2
42
1.51
15842--15866
12
2.1
12
100
0
50
48
0
8
44
1.32
15863--15913
18
2.7
19
78
9
68
29
5
0
64
1.17
15863--15914
19
2.7
19
75
19
54
30
5
0
63
1.18
18996--19032
19
2.0
18
89
5
56
40
2
0
56
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22726--22751
8
3.2
8
100
0
52
61
11
0
26
1.30

Tables:   1

The End!