Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2068
Parameters: 2 7 7 80 10 50 1000
Length:  71886

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13699--13730
16
2.0
16
100
0
64
43
31
18
6
1.75
22267--22338
20
3.6
19
77
7
81
40
12
13
33
1.83
25451--25491
3
13.7
3
100
0
82
65
0
0
34
0.93
26018--26068
20
2.5
21
80
6
59
45
0
0
54
0.99
26325--26385
19
3.2
18
80
13
61
52
1
0
45
1.10
26553--26593
5
7.8
5
94
5
64
56
0
0
43
0.99
26553--26595
22
2.0
21
95
4
77
55
0
0
44
0.99
28448--28502
28
1.9
29
85
3
76
36
3
0
60
1.15
29170--29219
15
3.1
16
91
8
84
40
12
12
36
1.79
28918--29457
284
1.9
283
98
0
1053
46
11
6
35
1.66
30815--30854
2
20.0
2
89
0
62
45
0
2
52
1.14
30815--30870
12
4.6
12
86
2
58
39
0
5
55
1.23
31416--31447
16
2.0
16
93
0
55
28
3
0
68
1.04
31534--31599
25
2.7
23
76
17
62
56
6
0
37
1.24
31561--31634
12
6.0
12
75
17
62
55
2
0
41
1.14
31549--31629
25
3.2
25
77
16
78
56
4
0
38
1.21
31643--31683
21
2.0
21
90
4
66
56
0
0
43
0.99
31687--31727
21
2.0
21
90
0
64
46
0
2
51
1.14
31638--31828
99
1.9
102
79
11
216
45
3
2
48
1.32
32498--32566
32
2.2
32
84
5
88
31
28
15
23
1.95
34143--34183
18
2.5
15
85
14
55
19
0
2
78
0.87
35137--35177
20
2.0
20
100
0
82
24
26
9
39
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35929--37263
42
31.8
42
79
6
1043
37
19
30
12
1.88
35931--37245
335
3.9
335
83
4
1360
37
19
31
12
1.88
49932--49972
18
2.5
15
85
14
55
19
0
2
78
0.87
50917--50980
20
3.2
20
95
0
119
23
25
10
40
1.87
52153--52289
41
3.4
40
85
9
181
32
18
12
36
1.88
52153--52291
20
6.8
20
75
16
126
32
18
12
36
1.88
55115--55150
17
2.2
16
90
5
54
47
25
11
16
1.79
56206--56270
26
2.5
25
80
14
69
33
4
4
56
1.40
56255--56294
20
2.0
20
90
5
62
30
2
0
67
1.04
57428--57466
17
2.4
16
87
8
53
25
2
0
71
0.98

Tables:   1

The End!