Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold2071
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 45480
ACGTcount: A:0.31, C:0.18, G:0.17, T:0.34
Found at i:243 original size:13 final size:13
Alignment explanation
Indices: 225--250 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
215 CAATTTTTTG
225 TGTATCGATACAT
1 TGTATCGATACAT
238 TGTATCGATACAT
1 TGTATCGATACAT
251 ACTTGCTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:1980 original size:29 final size:28
Alignment explanation
Indices: 1920--1988 Score: 70
Period size: 29 Copynumber: 2.5 Consensus size: 28
1910 TTATTCACGA
*
1920 GGATACT-CTAATCCCATTCTTTCGAAG
1 GGATACTCCTAACCCCATTCTTTCGAAG
* * *
1947 AGATACTCCTAACCCTCATTCTTTGGAGG
1 GGATACTCCTAACCC-CATTCTTTCGAAG
*
1976 GGATATTCC-AACC
1 GGATACTCCTAACC
1989 TCGTTTTTAA
Statistics
Matches: 34, Mismatches: 6, Indels: 3
0.79 0.14 0.07
Matches are distributed among these distances:
27 6 0.18
28 10 0.29
29 18 0.53
ACGTcount: A:0.26, C:0.28, G:0.16, T:0.30
Consensus pattern (28 bp):
GGATACTCCTAACCCCATTCTTTCGAAG
Found at i:5403 original size:8 final size:8
Alignment explanation
Indices: 5382--5429 Score: 51
Period size: 9 Copynumber: 5.4 Consensus size: 8
5372 GATAAGGGAG
5382 AAAGAAAA
1 AAAGAAAA
5390 ATAAGAAAA
1 A-AAGAAAA
5399 AAAGAAGAAA
1 AAAG-A-AAA
5409 AGAAGAAAA
1 A-AAGAAAA
5418 AATAGAAAA
1 AA-AGAAAA
5427 AAA
1 AAA
5430 AACTAAGCTA
Statistics
Matches: 35, Mismatches: 0, Indels: 10
0.78 0.00 0.22
Matches are distributed among these distances:
8 6 0.17
9 21 0.60
10 5 0.14
11 3 0.09
ACGTcount: A:0.81, C:0.00, G:0.15, T:0.04
Consensus pattern (8 bp):
AAAGAAAA
Found at i:5414 original size:19 final size:19
Alignment explanation
Indices: 5386--5428 Score: 61
Period size: 19 Copynumber: 2.3 Consensus size: 19
5376 AGGGAGAAAG
*
5386 AAAAATAAGAAAAAA-AGA
1 AAAAAGAAGAAAAAATAGA
5404 AGAAAAGAAGAAAAAATAGA
1 A-AAAAGAAGAAAAAATAGA
5424 AAAAA
1 AAAAA
5429 AAACTAAGCT
Statistics
Matches: 22, Mismatches: 1, Indels: 3
0.85 0.04 0.12
Matches are distributed among these distances:
18 1 0.05
19 17 0.77
20 4 0.18
ACGTcount: A:0.81, C:0.00, G:0.14, T:0.05
Consensus pattern (19 bp):
AAAAAGAAGAAAAAATAGA
Found at i:6580 original size:163 final size:162
Alignment explanation
Indices: 6301--6741 Score: 593
Period size: 163 Copynumber: 2.7 Consensus size: 162
6291 AGTAAAAATT
** *
6301 AAATATTAATCA-TTTTTTAATCTTTTATATTCCTATGGAGGTCGGTAGGGGTATAAAAGATTTC
1 AAATATTAATCATTTTTTTAATCTTTTATATTCCTATGGAAATCCGTAGGGGTATAAAAGATTTC
* ** * * * *
6365 AAAAACTTTTGGTATCTTTTCAGATTTCCATTAAGGTATGAATAAT-ATTTTTCGAAAGTAAATA
66 AAAAACTTTTCGTATCTTTTTGGGTTTCCATTAAGGTA-CAA-AATGATTTTTCAAAAATAAATA
* * * **
6429 AATAAAATTAAATTAATACTTTCATGATTGAAAC
129 AACAAAATTAAATTAACACTTTCATAATCAAAAC
* *
6463 AAATATTAATCATTTTTTTAATCTTTTATATTCCTATGGAAATCTGTAGAGGTATAAAAGATTTC
1 AAATATTAATCATTTTTTTAATCTTTTATATTCCTATGGAAATCCGTAGGGGTATAAAAGATTTC
* *
6528 -AAAACTTTTTGTATCTTTTTGGGTTTTCATTAAGGTACAAAATGGCATTTTTCAAAAATAAATA
66 AAAAACTTTTCGTATCTTTTTGGGTTTCCATTAAGGTACAAAAT-G-ATTTTTCAAAAATAAATA
* *
6592 AACAAAATTAAATTGACACTTTCATAATCAAAAT
129 AACAAAATTAAATTAACACTTTCATAATCAAAAC
**
6626 AAATATTAATCATTTTTTT-ATCTTTTATATTTTTATGGAAATCCGTAGGGGTATAAAAGATTTC
1 AAATATTAATCATTTTTTTAATCTTTTATATTCCTATGGAAATCCGTAGGGGTATAAAAGATTTC
* *
6690 AAAAACTTTTCGTATCTTTTTGGGTTTCCATTAAGGTACGAAATGATATTTC
66 AAAAACTTTTCGTATCTTTTTGGGTTTCCATTAAGGTACAAAATGATTTTTC
6742 GAGAAAGAGA
Statistics
Matches: 247, Mismatches: 27, Indels: 11
0.87 0.09 0.04
Matches are distributed among these distances:
160 3 0.01
161 8 0.03
162 86 0.35
163 150 0.61
ACGTcount: A:0.37, C:0.10, G:0.12, T:0.41
Consensus pattern (162 bp):
AAATATTAATCATTTTTTTAATCTTTTATATTCCTATGGAAATCCGTAGGGGTATAAAAGATTTC
AAAAACTTTTCGTATCTTTTTGGGTTTCCATTAAGGTACAAAATGATTTTTCAAAAATAAATAAA
CAAAATTAAATTAACACTTTCATAATCAAAAC
Found at i:9234 original size:50 final size:50
Alignment explanation
Indices: 9154--9287 Score: 187
Period size: 50 Copynumber: 2.7 Consensus size: 50
9144 TTCACAATAT
* *
9154 GTATCGATACATTATTCATTGTATCGATACATTCTGGGTTTTACCCAGAC
1 GTATCGATACATTTTTCATTGTATCAATACATTCTGGGTTTTACCCAGAC
* * *
9204 GTATCGATACATTTTTTATTGTATCAATACATTCTGGGTTTTACTCAGAT
1 GTATCGATACATTTTTCATTGTATCAATACATTCTGGGTTTTACCCAGAC
* * **
9254 GTATCGATACATTTCTCAATGTATCGGTACATTC
1 GTATCGATACATTTTTCATTGTATCAATACATTC
9288 AGGCATTTTT
Statistics
Matches: 74, Mismatches: 10, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
50 74 1.00
ACGTcount: A:0.26, C:0.18, G:0.15, T:0.41
Consensus pattern (50 bp):
GTATCGATACATTTTTCATTGTATCAATACATTCTGGGTTTTACCCAGAC
Found at i:9277 original size:20 final size:21
Alignment explanation
Indices: 9247--9286 Score: 64
Period size: 20 Copynumber: 2.0 Consensus size: 21
9237 CTGGGTTTTA
9247 CTCAGATGTATCGATACATTT
1 CTCAGATGTATCGATACATTT
*
9268 CTCA-ATGTATCGGTACATT
1 CTCAGATGTATCGATACATT
9287 CAGGCATTTT
Statistics
Matches: 18, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
20 14 0.78
21 4 0.22
ACGTcount: A:0.28, C:0.20, G:0.15, T:0.38
Consensus pattern (21 bp):
CTCAGATGTATCGATACATTT
Found at i:11625 original size:13 final size:13
Alignment explanation
Indices: 11607--11632 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
11597 CAATTTTTTG
11607 TGTATCGATACAT
1 TGTATCGATACAT
11620 TGTATCGATACAT
1 TGTATCGATACAT
11633 ACTTTGTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:11644 original size:32 final size:33
Alignment explanation
Indices: 11587--11650 Score: 103
Period size: 32 Copynumber: 2.0 Consensus size: 33
11577 TACAAGCCAA
**
11587 TGTATCGATACAATTTTTTGTGTATCGATACAT
1 TGTATCGATACAATACTTTGTGTATCGATACAT
11620 TGTATCGATAC-ATACTTTGTGTATCGATACA
1 TGTATCGATACAATACTTTGTGTATCGATACA
11651 AGTTTGGCTA
Statistics
Matches: 29, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
32 18 0.62
33 11 0.38
ACGTcount: A:0.28, C:0.14, G:0.16, T:0.42
Consensus pattern (33 bp):
TGTATCGATACAATACTTTGTGTATCGATACAT
Found at i:16294 original size:15 final size:15
Alignment explanation
Indices: 16274--16304 Score: 53
Period size: 15 Copynumber: 2.1 Consensus size: 15
16264 ATTTCGTTTG
*
16274 GAGCTTCTTCATTTT
1 GAGCTTCCTCATTTT
16289 GAGCTTCCTCATTTT
1 GAGCTTCCTCATTTT
16304 G
1 G
16305 GACATTTTTA
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 15 1.00
ACGTcount: A:0.13, C:0.23, G:0.16, T:0.48
Consensus pattern (15 bp):
GAGCTTCCTCATTTT
Found at i:19242 original size:157 final size:158
Alignment explanation
Indices: 19041--19333 Score: 387
Period size: 157 Copynumber: 1.9 Consensus size: 158
19031 TTAAACCCCA
*
19041 TTATTTCTGAGGGGATACTCCAACCCCAGCTTTATTTCTAAAACATCGATTTTTCACAATCGAG-
1 TTATTTCCGAGGGGATACTCCAACCCCAGCTTTATTTCTAAAACATCGATTTTTCACAATCG-GT
* * * * *
19105 GATACTCCAACCCCATTATTTTTGAGGGGATACTCCAACTCTGGCTTTATTTCTAAAACATTAAT
65 GATACTCCAACCCCATCATTTCTGAGGGGATACTCCAACCCTGGCTTTATCTCCAAAACATTAAT
19170 TTTTCATAATCAGGGATACTTCAGCCTTG
130 TTTTCATAATCAGGGATACTTCAGCCTTG
* * *
19199 TTATTTCCGA-GGGATACTCTAACCCC-GATTTTATTTCCT-AAACATCGATTTTTCACCATCGG
1 TTATTTCCGAGGGGATACTCCAACCCCAG-CTTTATTT-CTAAAACATCGATTTTTCACAATCGG
* * * * ** *
19261 TGATACTTCAATCTCGTCATTTCTGAGGGGATACTCCAACCCTGTTTTTATCTCCAAAATATTAA
64 TGATACTCCAACCCCATCATTTCTGAGGGGATACTCCAACCCTGGCTTTATCTCCAAAACATTAA
19326 TTTTTCAT
129 TTTTTCAT
19334 CGGGGAATGT
Statistics
Matches: 116, Mismatches: 16, Indels: 7
0.83 0.12 0.05
Matches are distributed among these distances:
156 2 0.02
157 103 0.89
158 11 0.09
ACGTcount: A:0.27, C:0.23, G:0.13, T:0.37
Consensus pattern (158 bp):
TTATTTCCGAGGGGATACTCCAACCCCAGCTTTATTTCTAAAACATCGATTTTTCACAATCGGTG
ATACTCCAACCCCATCATTTCTGAGGGGATACTCCAACCCTGGCTTTATCTCCAAAACATTAATT
TTTCATAATCAGGGATACTTCAGCCTTG
Found at i:19253 original size:78 final size:78
Alignment explanation
Indices: 19026--19302 Score: 299
Period size: 79 Copynumber: 3.5 Consensus size: 78
19016 CAAAATTGGA
* * *
19026 GATACTTAAACCCCATTATTTCTGAGGGGATACTCCAACCCC-AGCTTTATTTCTAAAACATCGA
1 GATACTTCAACCTCGTTATTTCTGAGGGGATACTCCAACCCCGA-CTTTATTTCTAAAACATCGA
19090 TTTTTCACAATCGAG
65 TTTTTCACAATCG-G
* * * * * * * **
19105 GATACTCCAACCCCATTATTTTTGAGGGGATACTCCAACTCTGGCTTTATTTCTAAAACATTAAT
1 GATACTTCAACCTCGTTATTTCTGAGGGGATACTCCAACCCCGACTTTATTTCTAAAACATCGAT
*
19170 TTTTCATAATCAGG
66 TTTTCACAATC-GG
* * * * *
19184 GATACTTCAGCCTTGTTATTTCCGA-GGGATACTCTAACCCCGATTTTATTTCCT-AAACATCGA
1 GATACTTCAACCTCGTTATTTCTGAGGGGATACTCCAACCCCGACTTTATTT-CTAAAACATCGA
*
19247 TTTTTCACCATCGG
65 TTTTTCACAATCGG
* *
19261 TGATACTTCAATCTCGTCATTTCTGAGGGGATACTCCAACCC
1 -GATACTTCAACCTCGTTATTTCTGAGGGGATACTCCAACCC
19303 TGTTTTTATC
Statistics
Matches: 162, Mismatches: 31, Indels: 10
0.80 0.15 0.05
Matches are distributed among these distances:
77 2 0.01
78 58 0.36
79 101 0.62
80 1 0.01
ACGTcount: A:0.27, C:0.25, G:0.14, T:0.34
Consensus pattern (78 bp):
GATACTTCAACCTCGTTATTTCTGAGGGGATACTCCAACCCCGACTTTATTTCTAAAACATCGAT
TTTTCACAATCGG
Found at i:21390 original size:12 final size:12
Alignment explanation
Indices: 21372--21403 Score: 55
Period size: 12 Copynumber: 2.7 Consensus size: 12
21362 AAGGTGGTGT
21372 ATTTATTTATTC
1 ATTTATTTATTC
*
21384 TTTTATTTATTC
1 ATTTATTTATTC
21396 ATTTATTT
1 ATTTATTT
21404 TGTTTTGTTT
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
12 18 1.00
ACGTcount: A:0.22, C:0.06, G:0.00, T:0.72
Consensus pattern (12 bp):
ATTTATTTATTC
Found at i:23894 original size:32 final size:30
Alignment explanation
Indices: 23858--23916 Score: 75
Period size: 32 Copynumber: 1.9 Consensus size: 30
23848 GAAAACAAAT
23858 ACAAAGAGCT-TAGAAAAATAATAACAATATGA
1 ACAAA-AGCTCTAGAAAAAT-ATAA-AATATGA
*
23890 ACAAAAGCTCTTGAAAAATATAAAATA
1 ACAAAAGCTCTAGAAAAATATAAAATA
23917 CTTTGATCTA
Statistics
Matches: 25, Mismatches: 1, Indels: 4
0.83 0.03 0.13
Matches are distributed among these distances:
30 4 0.16
31 8 0.32
32 13 0.52
ACGTcount: A:0.59, C:0.10, G:0.10, T:0.20
Consensus pattern (30 bp):
ACAAAAGCTCTAGAAAAATATAAAATATGA
Found at i:24215 original size:13 final size:13
Alignment explanation
Indices: 24197--24222 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
24187 AATTTTTTTG
24197 TGTATCGATACAT
1 TGTATCGATACAT
24210 TGTATCGATACAT
1 TGTATCGATACAT
24223 ACTTGGTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:26801 original size:13 final size:13
Alignment explanation
Indices: 26783--26820 Score: 67
Period size: 13 Copynumber: 2.9 Consensus size: 13
26773 ATAATCCCCC
26783 TGTATCGATACAG
1 TGTATCGATACAG
*
26796 TGTATCGATACAT
1 TGTATCGATACAG
26809 TGTATCGATACA
1 TGTATCGATACA
26821 AAGAAAAATG
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
13 24 1.00
ACGTcount: A:0.32, C:0.16, G:0.18, T:0.34
Consensus pattern (13 bp):
TGTATCGATACAG
Found at i:28430 original size:15 final size:15
Alignment explanation
Indices: 28394--28431 Score: 58
Period size: 15 Copynumber: 2.5 Consensus size: 15
28384 TTCATCAATT
* *
28394 TCATTTGGAGCTTCT
1 TCATTTTGAGCTTCC
28409 TCATTTTGAGCTTCC
1 TCATTTTGAGCTTCC
28424 TCATTTTG
1 TCATTTTG
28432 GACATTTTTA
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
15 21 1.00
ACGTcount: A:0.13, C:0.21, G:0.16, T:0.50
Consensus pattern (15 bp):
TCATTTTGAGCTTCC
Found at i:30262 original size:21 final size:21
Alignment explanation
Indices: 30233--30277 Score: 56
Period size: 21 Copynumber: 2.1 Consensus size: 21
30223 AAGTTTTTAT
*
30233 TTTTCTTAGCTAAC-TCATTA
1 TTTTCTTAGCCAACTTCATTA
*
30253 TTTTCATTAGCCAACTTCTTTA
1 TTTTC-TTAGCCAACTTCATTA
30275 TTT
1 TTT
30278 CAACTTGCAA
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
20 5 0.24
21 8 0.38
22 8 0.38
ACGTcount: A:0.22, C:0.20, G:0.04, T:0.53
Consensus pattern (21 bp):
TTTTCTTAGCCAACTTCATTA
Found at i:32194 original size:32 final size:30
Alignment explanation
Indices: 32158--32216 Score: 75
Period size: 32 Copynumber: 1.9 Consensus size: 30
32148 GAAAACAAAT
32158 ACAAAGAGCT-TAGAAAAATAATAACAATATGA
1 ACAAA-AGCTCTAGAAAAAT-ATAA-AATATGA
*
32190 ACAAAAGCTCTTGAAAAATATAAAATA
1 ACAAAAGCTCTAGAAAAATATAAAATA
32217 CTTTGATCTA
Statistics
Matches: 25, Mismatches: 1, Indels: 4
0.83 0.03 0.13
Matches are distributed among these distances:
30 4 0.16
31 8 0.32
32 13 0.52
ACGTcount: A:0.59, C:0.10, G:0.10, T:0.20
Consensus pattern (30 bp):
ACAAAAGCTCTAGAAAAATATAAAATATGA
Found at i:38185 original size:13 final size:13
Alignment explanation
Indices: 38167--38193 Score: 54
Period size: 13 Copynumber: 2.1 Consensus size: 13
38157 ACATTTGTTC
38167 ATGTATCGATACA
1 ATGTATCGATACA
38180 ATGTATCGATACA
1 ATGTATCGATACA
38193 A
1 A
38194 AGCATAATGT
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 14 1.00
ACGTcount: A:0.41, C:0.15, G:0.15, T:0.30
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:38274 original size:13 final size:13
Alignment explanation
Indices: 38256--38288 Score: 66
Period size: 13 Copynumber: 2.5 Consensus size: 13
38246 ATAATATTCA
38256 ATACAAAGTATCG
1 ATACAAAGTATCG
38269 ATACAAAGTATCG
1 ATACAAAGTATCG
38282 ATACAAA
1 ATACAAA
38289 TACCTATGTA
Statistics
Matches: 20, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 20 1.00
ACGTcount: A:0.52, C:0.15, G:0.12, T:0.21
Consensus pattern (13 bp):
ATACAAAGTATCG
Found at i:40833 original size:15 final size:13
Alignment explanation
Indices: 40797--40837 Score: 55
Period size: 13 Copynumber: 3.0 Consensus size: 13
40787 ACATTTTTCT
40797 TTGTATCGATACA
1 TTGTATCGATACA
*
40810 TTCTATCGATACA
1 TTGTATCGATACA
40823 TAATGTATCGATACA
1 T--TGTATCGATACA
40838 GGGTAATTAT
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
13 13 0.54
15 11 0.46
ACGTcount: A:0.34, C:0.17, G:0.12, T:0.37
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:41001 original size:20 final size:20
Alignment explanation
Indices: 40958--41003 Score: 58
Period size: 21 Copynumber: 2.2 Consensus size: 20
40948 AAATCTTTTG
40958 CAAAATACTTGTTTTTCACTT
1 CAAAATACTTGTTTTTCAC-T
*
40979 CAAATTACTTCGTTTTTCA-T
1 CAAAATACTT-GTTTTTCACT
40999 CAAAA
1 CAAAA
41004 CCAGCATCAA
Statistics
Matches: 22, Mismatches: 2, Indels: 3
0.81 0.07 0.11
Matches are distributed among these distances:
20 5 0.23
21 9 0.41
22 8 0.36
ACGTcount: A:0.33, C:0.20, G:0.04, T:0.43
Consensus pattern (20 bp):
CAAAATACTTGTTTTTCACT
Found at i:43411 original size:13 final size:13
Alignment explanation
Indices: 43393--43418 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
43383 TACAGCAAGT
43393 ATGTATCGATACA
1 ATGTATCGATACA
43406 ATGTATCGATACA
1 ATGTATCGATACA
43419 CAGAAAATTG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:45026 original size:33 final size:33
Alignment explanation
Indices: 44984--45052 Score: 111
Period size: 33 Copynumber: 2.1 Consensus size: 33
44974 AGTTGATCAA
* *
44984 TTCACTTTCGCAATGCATGGATGAGCACTTTAG
1 TTCACTTTCGCAACGCATGGATGAGAACTTTAG
*
45017 TTCACTTTCGCAGCGCATGGATGAGAACTTTAG
1 TTCACTTTCGCAACGCATGGATGAGAACTTTAG
45050 TTC
1 TTC
45053 TCTTAACCGA
Statistics
Matches: 33, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
33 33 1.00
ACGTcount: A:0.23, C:0.22, G:0.22, T:0.33
Consensus pattern (33 bp):
TTCACTTTCGCAACGCATGGATGAGAACTTTAG
Done.