Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2079
Parameters: 2 7 7 80 10 50 1000
Length:  29504

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2078--2128
21
2.5
21
87
9
70
37
13
15
33
1.87
4271--4323
15
3.4
15
78
19
63
49
1
0
49
1.12
4271--4334
32
2.0
32
81
6
76
53
1
0
45
1.10
5152--5182
14
2.2
14
100
0
62
61
0
0
38
0.96
5614--5694
35
2.3
34
85
8
101
40
2
3
53
1.32
7960--8003
21
2.1
21
87
8
63
43
2
2
52
1.26
9490--9564
29
2.6
28
83
10
82
53
0
0
46
1.00
10693--10730
10
3.8
10
86
6
51
55
0
2
42
1.14
10721--10772
12
4.1
13
75
12
54
55
0
0
44
0.99
10705--10773
25
2.7
27
74
19
67
55
0
0
44
0.99
11212--11251
21
2.0
20
95
5
71
45
0
5
50
1.23
13107--13168
13
5.2
13
79
18
80
37
16
12
33
1.87
13219--13272
19
2.8
20
88
2
74
37
14
12
35
1.85
13258--13284
13
2.1
13
100
0
54
40
14
14
29
1.86
21435--21483
13
4.2
13
70
24
54
34
18
14
32
1.91
21435--21504
33
2.1
33
86
7
97
32
20
14
32
1.92
21533--21586
20
2.8
20
91
2
83
37
18
12
31
1.89
21992--22045
20
2.7
20
88
0
81
42
12
14
29
1.83
22077--22144
33
2.1
32
86
2
91
38
14
10
36
1.81
28267--28305
13
3.0
13
92
0
69
30
20
15
33
1.94
28437--28477
22
2.0
21
86
13
59
31
21
4
41
1.74

Tables:   1

The End!