Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2089
Parameters: 2 7 7 80 10 50 1000
Length:  18316

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2873--2899
10
2.7
10
100
0
54
0
0
22
77
0.76
12586--12678
1
93.0
1
73
0
60
84
13
0
1
0.67
12586--12678
13
7.2
12
76
13
78
84
13
0
1
0.67
12586--12678
18
5.3
18
75
13
95
84
13
0
1
0.67
12586--12678
30
3.3
27
81
12
98
84
13
0
1
0.67
14115--14404
30
9.8
30
75
10
195
28
31
16
23
1.96
14239--14407
85
2.0
86
82
4
207
31
30
17
20
1.96
14412--14501
43
2.1
43
91
0
144
26
25
17
30
1.98
14455--14608
52
2.9
53
80
4
184
24
24
16
35
1.95
15376--15400
13
1.9
13
100
0
50
36
16
16
32
1.90
15461--15485
13
1.9
13
100
0
50
32
16
16
36
1.90
15494--15617
52
2.4
51
90
2
203
35
17
17
29
1.93
17706--17755
27
2.0
26
88
11
77
22
44
18
16
1.87

Tables:   1

The End!