Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2091
Parameters: 2 7 7 80 10 50 1000
Length:  23063

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2228--2264
16
2.4
16
86
13
51
35
2
8
54
1.44
2269--2346
30
2.6
31
76
6
72
38
16
6
38
1.75
4762--4805
21
2.0
21
83
12
54
56
2
0
40
1.11
6612--6741
18
7.6
18
65
22
59
40
0
0
58
1.09
6612--6690
20
4.2
18
76
20
65
40
0
1
58
1.06
6703--6749
11
4.2
11
78
13
51
36
0
0
63
0.94
6685--6748
17
3.8
16
76
13
56
37
1
0
60
1.06
6594--6758
27
6.3
27
65
21
84
40
0
1
57
1.11
7115--7168
19
2.9
19
76
15
60
40
0
0
59
0.98
7221--7268
20
2.5
19
87
12
71
52
2
0
45
1.12
7920--8004
11
7.8
11
72
21
56
54
0
0
45
1.00
7925--8004
20
3.8
20
70
18
63
53
0
0
46
1.00
8563--8587
2
12.5
2
100
0
50
52
0
0
48
1.00
8657--8684
3
9.3
3
100
0
56
67
0
0
32
0.91
9186--9249
16
4.5
14
71
21
53
43
0
6
50
1.27
9200--9275
27
2.8
27
78
13
84
43
0
5
51
1.24
9255--9327
15
5.3
15
74
15
50
39
0
1
58
1.06
9256--9306
25
2.0
25
88
7
77
45
0
1
52
1.12
9288--9347
19
3.2
18
76
21
61
28
0
1
70
0.97
9265--9344
25
3.1
26
76
15
67
36
0
1
62
1.03
9312--9353
12
3.6
12
83
6
50
21
2
4
71
1.16
9295--9341
17
3.0
15
84
12
51
29
0
2
68
1.02
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9684--9727
19
2.2
22
84
15
60
63
0
4
31
1.14
10283--10330
23
2.2
21
82
13
62
41
8
6
43
1.60
10730--10824
49
1.9
50
82
6
122
50
1
16
31
1.52
12043--12077
18
2.0
18
88
5
54
45
0
0
54
0.99
12036--12110
14
4.8
16
71
26
54
40
2
0
57
1.13
12432--12486
29
1.9
28
89
10
85
45
0
0
54
0.99
12411--12505
31
3.2
31
80
8
106
46
3
0
50
1.17
19383--19427
20
2.2
21
88
4
65
57
0
13
28
1.36
21067--21132
27
2.5
26
72
13
64
57
6
0
36
1.23

Tables:   1

The End!