Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2092
Parameters: 2 7 7 80 10 50 1000
Length:  11628

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2116--2142
2
13.5
2
100
0
54
48
0
0
51
1.00
2199--2295
39
2.5
39
94
0
176
44
12
2
41
1.54
9708--9748
18
2.3
18
86
0
55
29
0
0
70
0.87
9714--9761
18
2.7
18
83
6
53
29
2
2
66
1.14
9844--9886
11
4.0
10
80
14
50
16
2
0
81
0.79
9843--9885
16
2.6
16
85
10
52
18
2
0
79
0.85
9843--9885
21
2.0
22
90
4
70
18
2
0
79
0.85
9843--9885
5
8.0
5
80
14
50
18
2
0
79
0.85
9844--9893
6
8.7
6
80
10
52
18
2
0
80
0.82
11314--11427
11
9.9
12
74
18
75
45
0
0
53
1.06
11311--11443
5
25.2
5
66
18
56
42
0
0
56
1.04
11316--11382
23
3.0
22
91
6
109
47
1
0
50
1.10
11321--11382
6
11.0
6
74
19
62
48
1
0
50
1.10
11375--11432
21
2.9
20
80
12
57
43
0
0
56
0.99
11376--11423
21
2.2
21
88
3
69
43
0
0
56
0.99
11494--11536
14
3.2
13
81
12
52
55
4
0
39
1.20

Tables:   1

The End!