Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2094
Parameters: 2 7 7 80 10 50 1000
Length:  27631

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
617--706
10
9.7
10
70
14
50
47
1
0
51
1.08
2778--2858
30
2.7
30
82
0
90
27
14
8
49
1.73
3634--3663
2
15.0
2
92
0
51
46
0
3
50
1.18
4331--4369
17
2.2
17
86
4
51
58
12
10
17
1.61
5468--5576
54
2.0
54
84
7
141
34
17
22
25
1.95
5693--5746
27
2.0
27
92
0
90
35
14
18
31
1.91
5732--5877
57
2.6
57
78
4
152
32
15
19
32
1.94
9628--9850
79
2.8
79
82
3
279
30
13
27
27
1.94
9782--9898
51
2.3
52
83
1
137
29
10
29
30
1.90
12236--12265
13
2.3
13
94
0
51
40
16
16
26
1.90
12860--13192
41
7.9
42
76
10
268
40
13
26
19
1.89
12887--13192
85
3.6
86
76
10
322
41
13
26
18
1.87
12999--13214
46
5.1
39
74
15
132
39
13
28
18
1.89
13189--13962
61
12.9
60
78
8
658
25
19
28
26
1.99
13186--13963
123
6.5
122
82
7
769
25
19
28
26
1.99
13380--13963
295
2.0
296
92
1
974
24
19
28
27
1.98
14306--14367
11
5.6
11
83
7
63
3
3
8
85
0.81
19963--20044
28
2.9
28
82
7
96
28
17
30
24
1.97
20027--20197
51
3.3
50
75
7
171
33
11
25
29
1.91
20180--20255
27
2.8
28
88
6
102
21
21
34
23
1.97
22721--22746
13
2.0
13
100
0
52
38
15
15
30
1.88
22700--22766
33
2.0
33
88
0
98
43
16
14
25
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22786--22853
19
3.9
18
76
23
83
38
14
11
35
1.83
22808--22832
13
1.9
13
100
0
50
32
16
16
36
1.90
22789--22851
32
2.0
32
96
0
117
36
15
12
34
1.86
22907--22952
1
46.0
1
93
0
65
4
2
0
93
0.41
22905--22949
23
2.0
23
100
0
90
8
2
0
88
0.58
23548--24500
55
17.3
55
93
3
1459
20
20
29
29
1.98
24364--24453
26
3.3
26
68
14
83
21
17
32
28
1.96
25482--25550
13
5.1
13
74
20
61
0
7
7
85
0.74
25497--25527
12
2.7
12
95
5
55
0
3
6
90
0.55
25482--25551
17
3.9
17
76
16
61
0
7
8
84
0.78
25482--25550
19
3.6
19
78
7
68
0
7
7
85
0.74
25506--25547
15
2.6
16
92
7
68
0
9
4
85
0.72

Tables:   1

The End!