Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2106
Parameters: 2 7 7 80 10 50 1000
Length:  47175

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
421--484
27
2.3
28
78
10
69
43
0
0
56
0.99
461--502
11
4.0
11
75
12
52
42
0
0
57
0.99
465--513
20
2.4
21
83
6
66
40
0
0
59
0.98
2155--2184
3
10.0
3
100
0
60
0
33
0
66
0.92
15381--15405
1
25.0
1
100
0
50
100
0
0
0
0.00
25254--25289
18
1.9
19
88
5
56
25
8
25
41
1.83
25676--25709
14
2.3
15
90
5
52
29
0
2
67
1.05
27205--27235
10
3.1
10
90
0
53
51
6
19
22
1.69
27947--27988
20
2.2
20
86
4
59
2
16
0
80
0.81
28305--28350
18
2.6
18
86
3
58
52
0
0
47
1.00
31791--31821
10
3.1
10
90
0
53
41
6
29
22
1.78
31845--31981
53
2.6
53
94
1
229
26
16
18
37
1.92
39161--39197
13
2.7
14
80
20
51
45
0
54
0
1.00
39209--39248
11
3.4
11
86
13
53
77
0
20
2
0.88
39198--39248
25
2.0
25
85
7
68
74
0
23
1
0.92
39283--39334
21
2.3
23
78
18
65
57
0
1
40
1.10
39827--39875
23
2.1
24
85
11
66
20
4
8
67
1.34
40015--40073
22
2.5
24
78
5
68
22
5
5
67
1.30
40656--40689
4
8.5
4
100
0
68
76
0
0
23
0.79
40720--40744
4
6.2
4
100
0
50
76
0
0
24
0.80
41537--41629
25
3.7
25
69
15
75
55
2
1
40
1.19
41724--41749
4
6.5
4
100
0
52
76
0
0
23
0.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43086--43125
3
13.3
3
89
0
62
60
35
5
0
1.19
43686--43728
21
2.0
21
100
0
86
30
23
27
18
1.98

Tables:   1

The End!