Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2114
Parameters: 2 7 7 80 10 50 1000
Length:  19704

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91--284
29
6.7
29
78
8
123
27
14
27
29
1.96
1--290
56
5.1
57
75
8
236
26
15
26
31
1.96
1--378
28
13.1
28
76
7
194
27
15
28
29
1.96
257--1140
29
29.9
29
76
9
657
31
13
29
26
1.93
250--1140
60
15.1
58
75
10
666
31
12
28
26
1.93
257--1140
59
15.0
58
76
8
639
31
13
29
26
1.93
3807--3874
19
3.9
19
78
21
76
35
11
16
36
1.85
3809--3871
32
2.0
32
93
0
108
34
12
17
34
1.88
3828--3852
13
1.9
13
100
0
50
36
16
16
32
1.90
3914--3939
13
2.0
13
100
0
52
30
15
15
38
1.88
3894--3960
33
2.0
33
88
0
98
25
14
16
43
1.86
3947--4023
31
2.5
31
93
4
129
31
14
15
38
1.87
3998--4042
20
2.1
22
92
8
76
33
15
8
42
1.78
6438--6505
27
2.5
27
87
2
91
25
29
20
25
1.99
6492--6662
52
3.3
51
77
14
170
29
25
12
32
1.93
6646--6722
28
2.8
28
87
0
100
23
33
19
23
1.97
6324--6723
213
1.9
212
87
4
592
28
27
13
30
1.94
6383--6737
108
3.3
106
71
14
307
27
27
14
30
1.95
19293--19349
1
57.0
1
96
0
105
98
0
1
0
0.13

Tables:   1

The End!