Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2115
Parameters: 2 7 7 80 10 50 1000
Length:  19590

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
179--216
12
3.1
13
85
11
53
68
0
0
31
0.90
1389--1461
36
2.0
36
94
0
128
21
23
23
31
1.98
3445--3540
47
2.0
48
95
2
176
30
13
7
48
1.69
3963--3999
5
7.6
5
82
17
51
75
0
0
24
0.80
3963--3999
9
3.9
9
92
7
56
75
0
0
24
0.80
5457--5482
13
2.0
13
100
0
52
30
15
15
38
1.88
6125--6208
39
2.1
39
86
2
114
32
26
5
35
1.81
7570--7612
20
2.1
20
82
4
50
11
30
41
16
1.83
7887--7933
21
2.3
21
82
10
62
44
4
19
31
1.70
12514--13111
298
2.0
296
99
0
1169
19
24
17
38
1.93
16159--16215
13
3.9
13
76
24
60
33
17
15
33
1.92
16139--16202
13
3.6
19
72
25
68
34
20
15
29
1.94
16139--16215
32
2.4
33
95
2
138
33
19
15
31
1.93
16203--16254
20
2.6
21
78
9
63
36
17
17
28
1.92
17083--17108
13
2.0
13
100
0
52
23
23
7
46
1.78
18982--19032
20
2.6
20
87
3
68
31
19
15
33
1.93
19061--19129
33
2.1
32
84
10
86
33
14
15
36
1.89
19078--19129
13
4.5
13
71
26
53
34
13
15
36
1.87

Tables:   1

The End!