Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2120
Parameters: 2 7 7 80 10 50 1000
Length:  36535

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7293--7322
11
2.7
11
89
0
51
53
0
0
46
1.00
8477--8510
16
2.2
16
89
5
52
82
0
17
0
0.67
8477--8510
5
6.6
5
89
3
50
82
0
17
0
0.67
9989--10069
29
2.7
30
81
14
96
39
6
2
51
1.40
9989--10079
29
3.1
28
75
15
76
39
8
2
49
1.46
13742--13776
2
17.5
2
100
0
70
48
0
0
51
1.00
17759--17793
16
2.2
16
100
0
70
45
0
5
48
1.26
17759--17793
2
17.5
2
87
0
52
45
0
5
48
1.26
19814--19849
12
3.0
12
87
0
54
33
8
0
58
1.28
19797--19845
18
2.8
18
90
3
73
34
14
0
51
1.43
21078--21119
17
2.6
16
85
14
59
57
2
0
40
1.12
21240--21268
3
9.7
3
100
0
58
68
0
0
31
0.89
21880--21914
2
18.5
2
88
11
56
45
0
0
54
0.99
24450--24479
12
2.6
12
94
5
53
63
0
0
36
0.95
24484--24543
31
1.9
32
86
3
86
60
5
0
35
1.19
25250--25298
3
17.0
3
87
12
68
28
0
2
69
1.00
27297--27321
4
6.2
4
100
0
50
24
0
24
52
1.48
28097--28297
80
2.5
81
80
4
228
32
23
19
24
1.98

Tables:   1

The End!