Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2121
Parameters: 2 7 7 80 10 50 1000
Length:  17362

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1661--1710
26
2.0
24
84
7
64
46
0
2
52
1.12
2522--2549
2
14.0
2
100
0
56
50
0
0
50
1.00
3014--3095
21
4.0
21
73
9
62
54
3
2
39
1.31
3049--3095
14
3.5
13
77
13
51
51
2
0
46
1.13
3447--3495
20
2.5
18
75
18
53
46
12
0
40
1.41
4241--4278
11
3.4
11
85
7
58
71
0
0
28
0.87
4435--4503
8
8.0
8
71
19
50
18
1
2
76
0.98
4435--4506
7
10.1
7
73
7
56
19
1
2
76
0.99
4432--4490
22
2.7
21
79
7
73
16
0
5
77
0.93
4735--4784
13
3.8
13
81
5
64
32
0
4
64
1.12
4950--4988
19
2.1
18
90
4
60
61
0
0
38
0.96
7205--7256
24
2.2
23
93
3
86
40
11
0
48
1.40
8106--8156
20
2.5
20
84
6
68
33
17
15
33
1.92
8188--8262
20
3.8
20
87
3
107
36
17
13
33
1.88
8248--8274
13
2.1
13
100
0
54
40
14
14
29
1.86
8229--8291
32
1.9
33
90
3
101
41
12
15
30
1.85
10576--10640
33
2.0
33
84
6
87
29
13
15
41
1.86
11323--11347
12
2.1
12
100
0
50
40
8
8
44
1.63
11394--11439
23
2.0
23
95
0
83
45
15
4
34
1.66
12734--12776
20
2.1
20
82
4
50
9
30
41
18
1.82
13219--13255
13
2.8
13
87
0
56
37
13
16
32
1.87

Tables:   1

The End!