Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2127
Parameters: 2 7 7 80 10 50 1000
Length:  40665

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108--159
27
1.9
27
92
0
86
48
11
23
17
1.79
790--849
27
2.2
27
87
3
84
25
18
36
20
1.94
651--914
106
2.5
106
77
4
298
31
17
24
26
1.97
3352--3456
20
5.8
20
75
24
117
40
13
17
28
1.87
3352--3452
35
2.9
36
85
11
156
40
13
16
28
1.87
3406--3435
13
2.3
13
94
0
51
43
16
10
30
1.81
3356--3455
33
3.0
33
89
7
148
41
14
16
29
1.87
3332--3472
20
7.7
19
75
21
115
41
12
16
29
1.85
3487--3516
13
2.3
13
94
0
51
43
10
16
30
1.81
3500--3554
20
2.8
20
91
0
92
45
14
14
25
1.83
7413--7452
20
2.0
20
95
0
71
35
7
10
47
1.65
8776--8830
27
2.0
27
92
0
92
49
10
25
14
1.76
9482--9540
16
3.7
16
72
21
52
45
1
3
49
1.28
14040--14103
29
2.2
29
82
0
74
43
7
7
40
1.62
18278--18923
323
2.0
323
99
0
1274
32
15
11
40
1.84
19018--19062
19
2.4
19
81
7
56
55
13
2
28
1.50
24816--24845
2
15.0
2
100
0
60
50
0
50
0
1.00
25117--25149
14
2.5
13
86
13
50
45
0
0
54
0.99
25235--25308
23
3.3
23
69
14
64
64
1
1
32
1.10
25467--25501
18
2.0
17
88
5
52
68
2
0
28
1.04
25472--25518
22
2.0
25
88
12
73
72
4
0
23
1.02
26083--26131
18
2.7
18
78
15
55
38
0
0
61
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26292--26346
24
2.3
25
79
17
64
61
0
0
38
0.96
26619--26657
13
3.0
13
88
0
60
33
20
12
33
1.91
26789--26829
22
2.0
20
86
13
57
31
21
4
41
1.74
29192--29217
13
2.0
13
100
0
52
38
15
15
30
1.88
29174--29237
33
2.0
32
87
3
92
39
18
14
28
1.90
33680--33757
27
2.9
27
76
1
84
47
20
6
25
1.74
34173--34224
18
2.9
18
76
17
56
38
11
5
44
1.65
34307--34357
2
25.5
2
100
0
102
49
0
0
50
1.00
34433--34478
24
1.9
24
82
8
58
47
0
2
50
1.13
34643--35394
351
2.1
345
84
5
812
39
9
6
44
1.63
35448--35488
21
1.9
21
85
5
55
56
2
0
41
1.13
36536--36601
20
3.3
20
83
8
73
54
0
0
45
0.99
38127--38174
24
2.0
24
83
0
60
27
6
2
64
1.28
38799--38917
59
2.0
59
96
0
220
37
4
19
38
1.71

Tables:   1

The End!