Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2128
Parameters: 2 7 7 80 10 50 1000
Length:  57304

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2173--2686
259
2.0
260
99
0
1021
34
20
14
30
1.93
5144--5180
16
2.3
16
100
0
74
62
5
10
21
1.48
12453--12484
2
16.0
2
100
0
64
50
0
50
0
1.00
12744--12797
27
1.9
28
81
7
65
51
1
1
44
1.22
16714--16783
27
2.5
28
84
13
92
24
7
24
44
1.78
21283--21352
27
2.5
28
84
13
92
24
7
24
44
1.78
23299--23334
13
2.6
15
79
20
51
58
0
0
41
0.98
24113--24157
2
22.5
2
100
0
90
48
0
0
51
1.00
25229--25289
29
2.1
29
90
3
97
55
1
3
39
1.26
25537--25626
45
2.0
45
97
0
171
28
12
8
50
1.70
29523--29603
42
1.9
42
94
0
144
25
18
27
28
1.98
29523--29590
21
3.2
21
65
8
57
25
17
26
30
1.97
29583--29618
18
2.0
18
94
0
63
22
19
33
25
1.97
31331--31452
62
2.0
62
91
0
199
46
14
17
21
1.83
31348--31439
31
3.0
30
70
9
78
44
15
18
21
1.86
31358--31451
31
3.0
31
70
11
93
45
14
18
21
1.85
31461--31521
25
2.4
25
91
2
95
40
13
8
37
1.74
43978--44095
58
2.0
59
90
3
184
38
22
13
26
1.91
49342--49383
13
2.9
15
82
10
52
69
0
2
28
1.01
55975--56023
13
3.6
13
83
8
62
34
0
0
65
0.93
56023--56061
18
2.3
18
86
8
55
69
2
0
28
1.02

Tables:   1

The End!