Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2132
Parameters: 2 7 7 80 10 50 1000
Length:  28695

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1900--1949
21
2.3
21
80
10
57
56
4
18
22
1.58
5852--5889
13
2.9
13
96
0
67
34
18
15
31
1.92
6001--6046
21
2.2
20
81
11
58
32
19
4
43
1.71
9530--9757
79
2.9
76
88
5
305
30
10
28
30
1.90
9611--9886
130
2.1
130
82
1
347
31
11
26
30
1.91
9689--9807
51
2.3
52
79
1
132
29
10
28
31
1.91
13622--13664
18
2.4
18
80
0
50
74
0
6
18
1.04
17030--17065
18
2.0
18
100
0
72
16
16
16
50
1.79
20035--20065
16
1.9
16
93
0
53
45
9
16
29
1.79
20105--20233
51
2.5
51
84
1
170
31
12
12
43
1.80
21147--21185
21
1.9
21
84
5
53
20
10
17
51
1.74
23988--24039
21
2.5
20
87
6
77
26
7
5
59
1.48
25997--26064
29
2.3
29
82
0
82
52
0
4
42
1.21
27080--27142
34
1.9
33
93
6
110
44
12
12
30
1.80

Tables:   1

The End!