Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2133
Parameters: 2 7 7 80 10 50 1000
Length:  45315

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3863--3896
18
1.9
18
94
5
61
23
11
11
52
1.70
4930--4973
2
22.0
2
100
0
88
50
0
50
0
1.00
9346--9384
17
2.4
16
83
8
51
66
2
0
30
1.05
16683--16724
20
2.1
20
86
8
59
47
0
4
47
1.23
18907--18970
31
2.1
30
88
8
94
46
1
0
51
1.10
19022--19280
131
2.0
132
87
6
386
54
1
2
40
1.25
23021--23093
24
2.9
26
75
17
66
64
1
0
34
1.02
23056--23101
23
2.0
23
87
8
67
60
0
2
36
1.09
23508--23593
41
2.1
43
82
8
108
40
0
1
58
1.06
25228--25277
2
25.0
2
100
0
100
50
0
0
50
1.00
27153--27198
21
2.2
21
85
14
60
23
6
2
67
1.25
29861--29896
2
18.0
2
100
0
72
50
0
0
50
1.00
32424--32454
2
15.5
2
100
0
62
48
0
0
51
1.00
33679--33726
2
24.0
2
95
0
87
50
2
0
47
1.12
36745--36769
2
12.5
2
100
0
50
52
0
48
0
1.00
36861--36902
22
1.9
22
90
0
66
52
0
0
47
1.00
37099--37153
3
18.7
3
96
3
103
67
0
0
32
0.91
37295--37344
2
25.0
2
100
0
100
50
0
0
50
1.00
37631--37659
4
7.2
4
100
0
58
24
0
0
75
0.80
38960--38989
2
15.0
2
100
0
60
50
0
0
50
1.00
41586--41634
20
2.6
18
78
15
55
71
2
2
24
1.07
41586--41635
19
2.7
17
80
17
55
70
2
2
26
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44086--44122
10
3.6
10
88
3
56
75
8
0
16
1.02

Tables:   1

The End!