Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2138
Parameters: 2 7 7 80 10 50 1000
Length:  16824

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3166--3225
13
4.5
13
79
10
52
83
8
8
0
0.82
3166--3215
14
3.6
14
81
5
57
84
8
8
0
0.79
3166--3225
27
2.1
29
84
6
79
83
8
8
0
0.82
3193--3219
12
2.2
12
100
0
54
85
14
0
0
0.61
4208--4634
59
7.3
59
90
2
523
27
28
19
24
1.98
4564--4707
74
1.9
74
87
2
209
31
27
20
20
1.97
5438--5514
21
3.7
21
85
3
102
36
12
16
33
1.88
5550--5617
19
3.9
19
76
21
76
36
11
13
38
1.81
5571--5595
13
1.9
13
100
0
50
36
16
16
32
1.90
5552--5614
32
2.0
32
93
0
108
36
12
14
36
1.84
5636--5691
20
2.8
20
83
0
76
26
14
14
44
1.83
8205--8371
52
3.2
51
81
2
199
31
26
10
32
1.89
8037--8371
51
6.4
53
70
11
201
30
26
11
31
1.92
8354--8435
28
2.9
28
80
10
80
24
31
17
26
1.97
8038--8430
211
1.9
211
87
4
578
29
27
12
30
1.93
10108--10204
19
5.7
19
73
26
110
34
15
18
31
1.92
10108--10202
32
3.0
32
100
0
190
33
15
18
31
1.93
10127--10183
13
3.9
13
76
24
60
35
15
17
31
1.92
10225--10278
20
2.7
19
86
8
72
27
18
14
38
1.90
14015--14416
201
2.0
201
92
0
662
40
8
16
34
1.79
15373--15416
22
2.0
22
100
0
88
36
9
9
45
1.68
15667--15700
16
2.2
16
94
5
61
17
11
23
47
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16116--16167
20
2.6
21
82
14
65
25
0
1
73
0.94
16681--16727
20
2.3
20
92
0
76
34
8
10
46
1.69

Tables:   1

The End!