Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2140
Parameters: 2 7 7 80 10 50 1000
Length:  31081

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2528--2554
13
2.1
13
100
0
54
29
14
14
40
1.86
2539--2594
19
2.9
19
84
10
78
30
14
17
37
1.90
2622--2884
125
2.1
125
100
0
526
35
15
15
33
1.89
2746--2814
33
2.1
33
83
5
86
33
14
17
34
1.90
7928--7953
13
2.0
13
100
0
52
30
15
15
38
1.88
7908--7971
32
2.0
33
87
3
94
28
14
17
40
1.88
8641--8742
51
2.0
50
94
3
179
37
24
3
34
1.74
8662--8762
51
2.0
51
84
3
132
44
22
2
29
1.68
8748--8773
12
2.2
12
100
0
52
50
7
0
42
1.31
10831--10993
82
2.0
84
80
9
192
24
19
3
52
1.61
13023--13074
19
2.7
20
84
6
70
28
13
17
40
1.87
13094--13149
21
2.7
21
100
0
112
26
17
10
44
1.82
14328--14353
13
2.0
13
100
0
52
30
15
15
38
1.88
14308--14371
32
2.0
33
90
3
103
28
14
15
42
1.86
18993--19023
15
2.1
15
93
0
53
12
22
16
48
1.80
27378--27428
22
2.4
22
90
6
79
39
1
31
27
1.68
27974--28000
13
2.1
13
100
0
54
29
14
14
40
1.86
27984--28039
19
2.9
19
84
7
78
30
16
17
35
1.92
28084--28114
13
2.4
13
94
0
53
35
16
12
35
1.87
29567--29897
103
3.2
100
78
9
328
28
26
14
30
1.95

Tables:   1

The End!