Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2142
Parameters: 2 7 7 80 10 50 1000
Length:  36661

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
339--380
19
2.2
20
86
4
59
40
2
0
57
1.12
4095--4828
154
4.8
154
71
5
453
40
17
15
26
1.89
6264--6297
14
2.4
14
90
0
50
11
2
2
82
0.89
8315--8381
33
2.0
33
88
0
98
34
11
13
40
1.81
8335--8359
13
1.9
13
100
0
50
36
16
16
32
1.90
8425--8449
13
1.9
13
100
0
50
32
16
16
36
1.90
8458--8578
52
2.3
52
98
0
233
34
17
18
29
1.94
14218--14273
21
2.6
21
85
2
76
37
17
12
32
1.88
16165--16209
24
1.9
24
86
4
65
33
8
4
53
1.52
24051--24199
52
2.9
51
88
4
226
30
17
18
33
1.94
24251--24308
20
3.0
20
84
2
73
46
12
10
31
1.74
25070--25297
48
4.8
47
79
11
234
31
16
24
27
1.96
25070--25297
97
2.4
92
84
7
280
31
16
24
27
1.96
25341--25659
30
10.7
30
81
7
312
25
16
28
29
1.97
25376--25595
123
1.8
123
84
4
302
25
15
30
29
1.96
27098--27229
1
132.0
1
75
0
111
1
1
9
87
0.69
27098--27230
21
6.4
20
83
13
146
1
1
10
86
0.71
27101--27229
10
12.7
10
80
10
138
1
1
10
86
0.70
27098--27229
11
11.4
11
78
19
135
1
1
9
87
0.69
27098--27228
49
2.7
49
87
8
173
1
1
9
87
0.69

Tables:   1

The End!