Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2153
Parameters: 2 7 7 80 10 50 1000
Length:  30693

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
707--778
32
2.2
35
76
16
82
55
2
2
38
1.29
769--816
19
2.6
18
80
9
60
58
2
0
39
1.10
769--820
20
2.7
19
77
16
63
57
1
0
40
1.10
1527--1560
8
4.2
8
96
0
59
85
0
0
14
0.60
2755--2806
26
2.0
25
89
10
79
51
0
0
48
1.00
2796--2853
14
3.9
16
77
20
63
37
0
0
62
0.96
2792--2853
17
4.4
14
76
23
67
38
0
0
61
0.96
2768--2860
8
10.5
10
70
22
57
40
0
0
59
0.98
2768--2861
27
3.5
27
74
10
86
40
0
0
59
0.97
2796--2864
16
4.6
16
78
20
69
36
0
0
63
0.94
2800--2861
10
6.8
10
71
25
57
33
0
0
66
0.92
2823--2864
17
2.6
16
92
7
75
33
0
0
66
0.92
11313--11349
2
18.5
2
100
0
74
48
0
51
0
1.00
11842--11879
2
19.0
2
94
0
67
47
0
52
0
1.00
22932--23013
37
2.1
39
82
6
96
52
1
1
45
1.16
23344--23389
17
2.8
17
87
6
60
54
0
0
45
0.99
23363--23435
23
3.2
24
74
16
75
41
0
0
58
0.98
23720--23744
2
12.5
2
100
0
50
52
0
0
48
1.00
24545--24583
15
2.6
14
81
14
51
46
0
5
48
1.24
24556--24600
22
2.1
21
83
4
54
46
0
4
48
1.22
27021--27084
27
2.4
27
100
0
128
32
12
34
20
1.90
27523--27560
3
12.7
3
100
0
76
0
31
0
68
0.90

Tables:   1

The End!