Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2155
Parameters: 2 7 7 80 10 50 1000
Length:  39412

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
858--913
26
2.0
26
83
13
67
42
3
0
53
1.18
879--929
16
3.2
16
76
15
52
43
0
0
56
0.99
887--928
17
2.4
18
80
11
52
42
0
0
57
0.99
884--969
14
6.0
14
72
18
70
46
0
0
53
1.00
1077--1198
62
2.0
61
85
7
167
42
2
6
48
1.42
2743--2788
19
2.3
19
85
7
56
41
10
15
32
1.82
6776--6827
26
1.9
28
85
14
74
55
3
1
38
1.29
8180--8216
18
2.1
18
94
0
65
54
10
13
21
1.69
9085--9125
20
2.0
20
100
0
82
24
4
9
60
1.47
11660--11706
18
2.6
18
77
12
60
55
0
14
29
1.40
12691--12740
26
1.9
26
87
0
73
54
0
4
42
1.19
12720--12757
18
2.1
18
85
9
51
52
2
5
39
1.38
16558--16612
24
2.4
23
80
14
60
40
0
1
58
1.09
17053--17086
17
1.9
18
88
5
52
35
5
0
58
1.22
17392--17426
16
2.2
16
89
0
52
51
8
8
31
1.63
17433--17458
12
2.2
12
100
0
52
73
0
0
26
0.84
17768--17801
17
2.0
17
88
0
50
73
0
2
23
0.97
23545--23571
1
27.0
1
100
0
54
0
0
0
100
0.00
23740--23786
20
2.4
19
76
16
51
21
2
6
70
1.20
31648--31781
51
2.7
50
88
3
180
36
11
18
32
1.88
34084--34686
154
4.0
150
78
6
552
32
8
9
50
1.64
36351--36797
153
3.0
149
76
11
412
24
14
19
40
1.89

Tables:   1

The End!