Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2160
Parameters: 2 7 7 80 10 50 1000
Length:  10604

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
212--327
52
2.3
51
95
1
205
30
17
18
34
1.93
335--359
13
1.9
13
100
0
50
36
16
16
32
1.90
423--447
13
1.9
13
100
0
50
32
16
16
36
1.90
401--467
33
2.0
33
88
0
98
40
13
11
34
1.81
1352--1580
49
4.7
49
85
8
308
31
17
24
27
1.97
1573--1661
30
3.0
30
74
19
96
16
16
35
30
1.92
1601--2051
30
15.3
29
77
9
353
25
16
29
29
1.97
1585--1840
88
2.9
88
84
6
331
21
18
29
30
1.97
1669--2046
209
1.8
206
86
1
549
26
16
28
28
1.97
1582--2051
59
7.9
57
75
10
324
24
17
29
28
1.97
2929--2958
10
3.1
10
90
9
53
83
0
10
6
0.81
4259--4604
31
11.3
31
88
6
478
23
29
16
30
1.96
4255--4596
61
5.6
61
87
6
498
22
30
16
31
1.95
4255--4597
123
2.8
120
89
7
532
22
30
16
31
1.95
4265--4781
122
4.3
121
81
9
432
22
30
15
32
1.94
4601--4959
61
5.8
60
76
14
334
22
30
12
33
1.92
4623--4959
34
10.8
32
70
16
174
21
30
12
35
1.91
4686--4961
95
2.9
94
88
3
401
22
30
12
35
1.91
4601--4955
157
2.3
150
78
12
390
23
30
12
34
1.91
5027--5881
101
8.4
100
88
3
1067
23
26
17
32
1.97
6663--6732
32
2.1
34
89
5
108
32
15
18
32
1.93
6779--6806
13
2.2
13
100
0
56
28
14
17
39
1.89

Tables:   1

The End!