Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2164
Parameters: 2 7 7 80 10 50 1000
Length:  8341

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2306--2345
10
3.9
11
84
15
59
45
0
5
50
1.23
2306--2352
10
4.7
10
82
15
53
42
0
4
53
1.20
2296--2349
20
2.5
22
85
14
85
42
0
3
53
1.18
2385--2454
21
3.0
21
75
25
77
32
10
0
57
1.32
2395--2443
13
3.6
13
80
20
64
32
10
0
57
1.32
2387--2463
28
2.7
29
91
6
129
31
9
0
59
1.28
2385--2518
49
2.7
49
83
6
144
35
5
0
58
1.20
2425--2558
34
4.3
31
73
18
100
38
1
0
60
1.06
2448--2561
11
11.1
11
71
24
65
38
0
0
61
0.96
2438--2620
60
3.0
59
82
10
185
36
0
0
63
0.99
2482--2588
27
3.9
28
74
20
84
38
0
0
61
0.96
2555--2603
15
3.1
15
81
16
62
36
0
0
63
0.95
2581--2636
17
3.1
18
87
5
78
23
0
0
76
0.78
2594--2678
43
1.9
45
80
4
102
28
1
2
68
1.09
6894--6927
15
2.3
15
100
0
68
61
0
0
38
0.96

Tables:   1

The End!