Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2175
Parameters: 2 7 7 80 10 50 1000
Length:  20200

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3049--3123
20
3.8
20
78
7
89
40
13
13
33
1.83
3046--3123
40
2.0
39
87
2
111
39
14
12
33
1.84
5958--5985
14
2.0
14
100
0
56
28
28
28
14
1.95
6548--6778
76
3.0
76
78
7
234
29
25
11
33
1.91
10073--10106
17
2.0
17
94
0
59
32
17
23
26
1.97
10544--10571
3
9.3
3
100
0
56
67
0
0
32
0.91
11460--11565
42
2.6
41
79
11
117
39
2
0
56
1.20
12319--12363
15
3.0
14
81
12
54
17
26
6
48
1.72
14155--14189
2
17.5
2
100
0
70
48
0
0
51
1.00
14204--14236
3
11.3
3
87
6
50
39
0
30
30
1.57
17644--17678
2
17.5
2
100
0
70
48
0
0
51
1.00
19822--19881
17
3.2
18
77
22
54
35
1
3
60
1.23

Tables:   1

The End!