Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2176
Parameters: 2 7 7 80 10 50 1000
Length:  33863

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--18267
29
634.3
29
79
12
16584
22
16
32
28
1.96
12--18267
57
318.2
57
80
11
17547
22
16
32
28
1.96
20--18264
343
53.0
333
77
14
5943
22
16
32
28
1.96
12--18268
200
91.1
194
79
12
13680
22
16
32
28
1.96
1808--1916
28
4.0
27
73
16
75
24
16
33
24
1.96
3222--3696
205
2.3
203
80
14
518
23
16
31
29
1.96
3912--4111
59
3.3
60
79
18
154
21
17
35
26
1.95
4171--4246
25
2.9
26
78
11
84
18
17
36
27
1.93
4449--4624
93
1.9
92
83
13
227
23
15
32
27
1.95
4856--18265
86
156.3
85
79
11
8953
22
16
32
28
1.96
5173--6147
28
34.0
26
69
19
151
22
16
33
27
1.95
6172--6319
28
5.2
28
79
17
107
18
18
33
29
1.95
19496--19549
1
54.0
1
77
0
54
0
1
9
88
0.58
19480--19547
9
7.3
9
82
11
50
2
4
8
83
0.87
19480--19549
10
6.9
10
80
7
52
2
4
8
84
0.85

Tables:   1

The End!