Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2181
Parameters: 2 7 7 80 10 50 1000
Length:  42553

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
548--611
14
4.9
13
76
14
53
73
1
0
25
0.92
520--592
24
3.0
24
71
23
64
73
2
1
21
1.03
642--724
43
2.0
41
85
4
112
25
24
21
28
1.99
872--912
20
2.0
20
100
0
82
41
9
24
24
1.85
1301--1395
49
2.0
48
82
2
118
28
40
15
15
1.89
1489--1551
22
2.9
22
80
0
81
26
44
14
14
1.83
1563--1652
31
2.9
31
88
0
126
22
41
20
16
1.90
1623--1689
22
3.2
22
83
8
79
22
44
20
11
1.84
9817--10052
97
2.4
97
85
2
314
29
30
12
28
1.93
22370--22549
101
1.8
96
82
11
220
43
12
17
26
1.84
25950--25991
21
2.0
22
86
13
61
38
16
11
33
1.86
26393--26446
20
2.7
20
88
0
72
35
20
11
33
1.88
26507--26556
19
2.5
20
90
3
75
36
16
16
32
1.90
26656--26698
23
2.0
22
90
9
70
37
9
6
46
1.63
27587--27621
18
1.9
18
94
0
61
42
22
5
28
1.76
33772--33803
15
2.1
15
94
0
55
28
25
0
46
1.53
35906--35979
35
2.2
33
80
11
87
45
10
2
40
1.53
39788--39825
19
2.0
19
89
0
58
13
23
5
57
1.56
40033--40087
29
1.9
28
92
3
92
50
3
7
38
1.48

Tables:   1

The End!