Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2185
Parameters: 2 7 7 80 10 50 1000
Length:  41316

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8373--8406
2
18.0
2
88
11
54
52
0
0
47
1.00
10347--10392
20
2.3
21
85
7
60
54
4
0
41
1.20
10475--10511
2
18.5
2
100
0
74
48
0
0
51
1.00
19687--19725
2
19.5
2
94
0
69
51
2
0
46
1.14
20096--20136
11
3.5
11
81
12
55
2
19
0
78
0.87
20096--20150
24
2.3
22
77
17
56
9
20
0
70
1.13
20491--20536
23
2.0
23
82
0
56
17
19
15
47
1.82
20974--21079
45
2.2
48
81
6
128
29
21
30
18
1.97
21112--22063
32
30.8
32
88
3
1263
18
18
32
30
1.95
21169--22054
367
2.4
367
95
1
1594
18
18
32
30
1.95
21169--22063
399
2.2
399
90
4
1448
18
18
33
30
1.95
22046--22892
27
31.0
27
94
1
1460
27
14
35
21
1.93
22046--22892
82
10.3
81
94
1
1460
27
14
35
21
1.93
22046--22892
109
7.8
108
95
1
1460
27
14
35
21
1.93
22851--22944
46
2.0
46
95
0
170
36
10
28
24
1.89
22912--22969
30
1.9
31
89
3
91
32
15
27
24
1.95
30355--30391
2
18.5
2
94
0
65
51
2
0
45
1.15
30771--30811
11
3.5
11
81
12
55
2
19
0
78
0.87
30771--30825
24
2.3
22
77
17
56
9
20
0
70
1.13
35751--35841
32
2.7
31
76
18
94
34
23
13
29
1.92
39909--39952
21
2.1
21
86
0
61
20
18
2
59
1.49

Tables:   1

The End!