Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2190
Parameters: 2 7 7 80 10 50 1000
Length:  35512

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--573
27
21.1
27
91
2
916
28
14
34
22
1.93
1--573
55
10.5
54
94
2
952
28
14
34
22
1.93
1623--1648
13
2.0
13
100
0
52
0
0
15
84
0.62
7740--7789
23
2.3
23
82
6
59
54
6
2
38
1.37
8321--8357
14
2.6
14
91
0
56
0
13
0
86
0.57
16937--16969
3
11.0
3
100
0
66
0
0
33
66
0.92
21870--21912
19
2.3
19
88
4
61
48
0
9
41
1.35
27714--27760
21
2.2
21
88
0
67
57
0
0
42
0.98
27714--27766
21
2.5
22
87
3
65
56
0
0
43
0.99
28967--29010
15
2.9
15
83
6
54
54
2
0
43
1.12
28960--29150
84
2.3
80
80
7
206
52
4
4
39
1.40
31110--31147
17
2.2
17
90
0
58
44
2
2
50
1.30
32394--32435
6
7.0
6
91
0
57
42
0
7
50
1.30
32738--32779
21
2.0
21
85
0
57
54
2
2
40
1.26
33697--33743
16
2.9
16
83
3
58
46
2
0
51
1.13
34045--34115
28
2.6
28
74
12
67
57
1
1
39
1.16
34064--34118
28
2.0
28
85
7
76
63
0
0
36
0.95

Tables:   1

The End!