Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2193
Parameters: 2 7 7 80 10 50 1000
Length:  41383

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
384--472
8
11.0
8
71
20
53
17
1
8
71
1.17
397--466
34
2.2
33
84
7
90
18
1
8
71
1.19
397--464
7
9.6
7
73
17
52
19
1
8
70
1.21
750--801
2
25.5
2
96
3
95
48
1
0
50
1.12
750--830
8
10.4
7
84
13
65
43
4
1
50
1.31
876--928
23
2.3
24
78
12
58
39
1
1
56
1.21
2458--2653
93
2.1
94
87
0
286
45
6
8
39
1.59
2704--2744
7
5.9
7
91
0
64
29
2
2
65
1.18
3187--3216
16
1.9
16
93
6
53
33
10
0
56
1.32
13673--13716
2
22.0
2
100
0
88
50
0
0
50
1.00
15523--15571
2
24.0
2
91
4
80
46
0
2
51
1.12
18922--18954
12
2.7
12
95
4
57
72
3
0
24
0.98
19809--19833
2
12.5
2
100
0
50
52
0
0
48
1.00
22402--22650
130
1.9
130
96
0
462
43
8
4
42
1.56
25144--25194
9
5.6
9
80
17
52
15
5
1
76
1.07
25125--25195
29
2.5
28
83
2
79
16
7
1
74
1.10
27576--27638
28
2.3
27
78
13
65
44
0
3
52
1.17
28454--28738
155
1.8
155
82
4
369
31
11
7
50
1.65
29242--29266
11
2.3
11
100
0
50
84
0
16
0
0.63
29247--29309
21
3.0
20
74
21
56
71
1
20
6
1.16
29253--29310
22
2.6
22
84
12
75
72
1
18
6
1.16
30076--30509
155
2.8
155
79
10
442
37
10
13
39
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30493--30535
7
5.9
7
91
8
68
81
0
0
18
0.69
30066--30509
156
2.9
154
79
10
483
37
10
13
39
1.78
30907--31469
155
3.6
151
79
6
556
23
15
20
39
1.91
36410--36463
20
2.7
20
82
0
63
35
12
14
37
1.85

Tables:   1

The End!