Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2207
Parameters: 2 7 7 80 10 50 1000
Length:  33464

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1787--1854
34
2.1
33
86
8
95
44
0
0
55
0.99
1787--1866
31
2.5
33
84
11
98
42
0
0
57
0.98
1803--1870
16
4.1
16
67
22
50
47
0
0
52
1.00
2955--3046
32
2.9
32
91
3
152
52
8
8
30
1.62
6323--6356
17
1.9
18
94
5
61
67
2
0
29
1.05
6421--6488
10
6.3
10
76
20
50
57
0
1
41
1.08
6463--6495
15
2.2
15
94
0
57
63
0
0
36
0.95
7071--7105
3
11.7
3
93
0
61
65
2
0
31
1.07
7266--7298
17
1.9
17
93
0
57
66
0
0
33
0.92
7248--7304
22
2.4
24
88
8
82
63
1
0
35
1.05
7346--7416
22
3.0
23
71
8
63
56
0
1
42
1.08
7338--7409
37
1.9
38
83
13
96
51
0
1
47
1.09
7607--7659
26
2.0
26
85
7
72
52
0
0
47
1.00
10211--10248
2
19.0
2
94
0
67
52
0
47
0
1.00
11342--11395
19
2.8
20
77
8
58
48
3
1
46
1.30
11504--11548
20
2.2
20
84
11
56
55
8
2
33
1.43
11514--11562
20
2.5
21
83
12
68
57
8
2
32
1.40
11672--11805
58
2.3
57
82
7
173
47
11
2
38
1.53
12121--12153
14
2.3
15
90
10
52
60
0
0
39
0.97
14311--14347
2
19.0
2
94
5
67
48
0
0
51
1.00
16075--16124
13
4.0
13
79
7
59
50
0
0
50
1.00
16643--16677
2
18.0
2
94
5
63
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17976--18039
18
3.6
18
72
19
53
54
0
0
45
0.99
18014--18089
33
2.2
34
82
13
86
52
1
0
46
1.08
20597--20642
24
2.0
24
86
4
67
56
8
2
32
1.42
21817--21858
18
2.4
17
84
15
50
35
0
2
61
1.09
21875--21933
25
2.4
25
86
8
77
40
0
3
55
1.16
22060--22107
15
3.4
14
82
11
62
66
0
0
33
0.92
22173--22205
18
1.9
17
88
11
50
54
0
0
45
0.99
23323--23351
2
14.5
2
100
0
58
48
0
0
51
1.00
25974--26013
17
2.4
17
91
0
62
20
20
27
32
1.97
27065--27266
6
33.0
6
65
19
53
40
0
1
57
1.12
27066--27155
27
3.4
26
77
13
85
43
0
1
55
1.07
27071--27170
17
6.2
16
69
23
59
46
0
0
54
1.00
27120--27187
30
2.2
31
80
17
79
47
0
0
52
1.00
27079--27198
54
2.2
55
79
7
129
45
0
0
55
0.99
27065--27195
12
10.3
12
68
19
61
43
0
0
55
1.05
27225--27266
14
3.3
13
83
9
52
35
2
0
61
1.09
27335--27373
20
2.0
20
94
0
69
41
10
15
33
1.81
27340--27385
20
2.3
20
84
0
56
47
8
13
30
1.72
27665--27726
24
2.6
24
82
5
63
30
1
1
66
1.11
29821--29853
14
2.4
14
90
10
50
39
0
0
60
0.97
29819--29870
27
1.9
27
84
7
70
46
0
0
53
1.00
30169--30300
58
2.3
57
84
6
169
39
2
12
46
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30412--30459
20
2.5
20
80
16
64
33
2
8
56
1.41
30580--30633
19
2.8
20
77
8
58
46
1
3
48
1.30
31730--31769
2
20.0
2
94
0
71
0
47
0
52
1.00

Tables:   1

The End!