Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2212
Parameters: 2 7 7 80 10 50 1000
Length:  6111

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
601--672
16
4.5
16
73
21
62
62
1
0
36
1.04
1621--1663
19
2.2
20
83
4
52
41
2
2
53
1.26
1633--1675
20
2.2
19
83
4
50
37
2
4
55
1.33
1724--1756
17
1.9
17
93
0
57
42
0
15
42
1.46
1871--1923
21
2.6
20
76
5
61
32
1
13
52
1.51
2071--2114
21
2.2
20
87
4
61
31
4
11
52
1.57
2482--2555
19
3.9
18
82
10
85
37
1
10
50
1.46
2500--2555
18
2.9
18
85
12
76
35
0
14
50
1.43
3286--3334
15
3.3
15
76
18
57
42
0
0
57
0.99
4006--4056
18
2.8
17
82
8
57
54
0
1
43
1.11
4021--4056
17
2.1
18
89
5
56
58
0
2
38
1.13
4444--4520
10
7.1
10
70
25
50
42
0
1
55
1.07
4477--4523
19
2.5
20
86
6
62
38
0
0
61
0.96
4626--4674
17
2.9
17
82
11
57
63
0
0
36
0.95
4626--4674
15
3.0
16
85
8
55
63
0
0
36
0.95
4754--4783
13
2.2
14
94
5
53
36
0
0
63
0.95
4888--4927
18
2.3
17
86
4
53
62
2
10
25
1.39
5456--5485
13
2.4
13
94
5
53
43
0
26
30
1.55
5576--5624
17
2.8
18
71
20
50
63
2
0
34
1.06

Tables:   1

The End!