Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2214
Parameters: 2 7 7 80 10 50 1000
Length:  22551

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3481--3547
33
1.9
34
88
8
100
34
13
11
40
1.81
4651--4690
20
2.0
20
100
0
80
35
10
25
30
1.88
4655--4707
20
2.6
20
87
3
70
37
11
18
32
1.87
7113--7209
41
2.4
41
96
3
178
26
25
4
43
1.73
9040--9120
33
2.5
33
91
0
135
32
16
17
34
1.92
9076--9100
13
1.9
13
100
0
50
32
8
20
40
1.81
9521--9546
13
2.0
13
100
0
52
38
15
15
30
1.88
9503--9566
33
2.0
33
87
9
96
40
17
14
28
1.88
9600--9643
20
2.1
22
91
8
74
40
20
9
29
1.83
11776--11826
21
2.4
21
77
9
59
62
3
9
23
1.42
15732--15770
13
3.0
13
92
0
60
30
15
15
38
1.88
18344--18369
13
2.0
13
100
0
52
38
15
15
30
1.88
18326--18389
33
2.0
33
87
9
96
40
17
14
28
1.88
18423--18466
20
2.1
22
91
8
74
40
20
9
29
1.83
19774--19816
3
15.0
3
90
9
72
65
0
0
34
0.93
19774--19816
14
3.2
14
87
12
72
65
0
0
34
0.93
21268--21309
23
2.0
22
86
13
61
35
7
54
2
1.41

Tables:   1

The End!