Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2217
Parameters: 2 7 7 80 10 50 1000
Length:  19442

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8908--9004
51
1.9
50
87
4
142
43
10
18
27
1.83
10056--10193
51
2.7
51
81
6
154
43
11
14
30
1.81
15177--15548
29
13.1
29
66
22
107
46
13
12
27
1.79
15177--15654
57
8.4
58
72
13
275
46
14
12
26
1.79
15504--15718
58
3.7
59
74
11
160
48
12
12
26
1.77
18773--18836
1
64.0
1
92
0
92
93
1
1
3
0.43
18841--18897
21
2.7
21
97
0
105
33
10
19
36
1.86
18953--19020
19
3.9
19
78
21
85
35
11
14
38
1.83
18974--18998
13
1.9
13
100
0
50
36
16
16
32
1.90
18955--19017
32
2.0
32
96
0
117
34
12
15
36
1.86
19060--19085
13
2.0
13
100
0
52
30
15
15
38
1.88
19040--19106
33
2.0
33
88
0
98
25
14
16
43
1.86

Tables:   1

The End!