Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2222
Parameters: 2 7 7 80 10 50 1000
Length:  15050

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
536--616
3
27.0
3
84
0
72
24
34
8
32
1.86
1700--1743
22
2.0
22
100
0
88
31
31
4
31
1.78
5268--5339
32
2.3
31
79
15
76
55
0
4
40
1.19
5331--5379
19
2.7
18
81
6
62
65
0
4
30
1.11
5582--5642
23
2.6
22
85
12
86
47
1
1
49
1.21
5632--5667
14
2.5
15
86
9
56
50
0
2
47
1.15
8343--8400
25
2.3
26
85
11
77
55
0
0
44
0.99

Tables:   1

The End!