Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2223
Parameters: 2 7 7 80 10 50 1000
Length:  15165

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
300--325
13
2.0
13
100
0
52
30
15
15
38
1.88
279--343
32
2.0
34
90
6
107
27
12
15
44
1.82
395--450
20
2.8
20
89
5
78
28
17
16
37
1.91
2616--2687
20
3.7
20
92
1
110
27
12
22
37
1.90
4807--5081
147
1.9
147
80
7
326
31
10
10
47
1.71
5479--5522
10
4.3
10
77
5
52
45
9
2
43
1.48
7406--7449
22
2.0
23
82
13
56
31
0
13
54
1.39
7744--8105
163
2.3
157
82
7
412
25
12
20
41
1.87
10711--10745
12
2.9
12
100
0
70
40
25
8
25
1.84
11382--11413
16
1.9
17
93
6
57
75
0
25
0
0.81
13752--13866
1
115.0
1
72
0
77
85
7
3
3
0.82
13751--13866
33
3.5
31
78
13
124
84
8
3
3
0.85
13753--13867
46
2.5
44
86
8
151
84
7
4
3
0.86
13757--13863
20
4.9
22
81
13
116
84
8
3
3
0.86

Tables:   1

The End!